ncRNA ID | vvi-miR2950-3p |
Species | Vitis vinifera |
Class | miRNA |
Genome position | chr7:14340407-14340513 [+] |
Reference genome | Genoscope-20100122 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 66 - UGGUGUGCACGGGAUGGAAUA - 86 |
Stem-loop(if miRNA) |
UGGCUUA      C UG                U       UG   --    GC        CAUGGG U  UGAUGUAUUCCAUCUC UGCACAC  GAC  CAGC  U        |||||| |  |||||||||||||||| |||||||  |||  ||||        GUACUU G  ACUACAUAAGGUAGGG ACGUGUG  UUG  GUCG  C -GGUGUA      A GU                C       GU   AC    AC |
Stem-loop sequence | UGGCUUACAUGGGCUUGUGAUGUAUUCCAUCUCUUGCACACUGGACCAGCGCUCCAGCUGCAGUUUGGUGUGCACGGGAUGGAAUACAUCAUGGAUUCAUGAUGUGG |
1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |