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BaseInfo

ncRNA ID vvi-miR2950-3p
Species Vitis vinifera
Class miRNA
Genome position chr7:14340407-14340513 [+]
Reference genome Genoscope-20100122
Source miRBase
Length 21
Mature sequence(if miRNA) 66 - UGGUGUGCACGGGAUGGAAUA - 86
Stem-loop(if miRNA) UGGCUUA      C UG                U       UG   --    GC
       CAUGGG U  UGAUGUAUUCCAUCUC UGCACAC  GAC  CAGC  U
       |||||| |  |||||||||||||||| |||||||  |||  ||||
       GUACUU G  ACUACAUAAGGUAGGG ACGUGUG  UUG  GUCG  C
-GGUGUA      A GU                C       GU   AC    AC
Stem-loop sequence UGGCUUACAUGGGCUUGUGAUGUAUUCCAUCUCUUGCACACUGGACCAGCGCUCCAGCUGCAGUUUGGUGUGCACGGGAUGGAAUACAUCAUGGAUUCAUGAUGUGG

Reference

1 PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis";
Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J;
Plant J. 62:960-976(2010).