ncRNA ID | ath-miRf10278-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - CUGCUCGACCUGGGGGUCGAGUG - NA |
Stem-loop(if miRNA) |
      G           GU       UG -U  A  G A AGGAGG CACUUGACCUC  GGUCGAG  G  GA GU A G |||||| |||||||||||  |||||||  |  || || | U UUCUCU GUGAGCUGGGG  CCAGCUC  C  CU UA U G       G           GU       GU UC  G  G G |
Stem-loop sequence | AGGAGGGCACUUGACCUCGUGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCCUCUGCUCGACCUGGGGGUCGAGUGGUCUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_103391.1 |
|
1.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget | |||||||||
BT025674.1 |
|
2.5 | Arabidopsis thaliana | NA | coding protein | psRNATarget | |||||||||
EF183194.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget |