ncRNA ID | vvi-miR477b-3p |
Species | Vitis vinifera |
Class | miRNA |
Genome position | chr2:1237689-1237805 [+] |
Reference genome | Genoscope-20100122 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 75 - CGAAGUCUUUGGGGAGAGUGG - 95 |
Stem-loop(if miRNA) |
GCCAACA       UUUCUA   CU      UU U          U   A      GUA        CGAGGCA      UUG  CACUCU  C CAAGGGCUUC AGC UUGCCA   A        |||||||      |||  ||||||  | |||||||||| ||| ||||||   C        GCUCUGU      AAC  GUGAGA  G GUUUCUGAAG UCG AACGGU   A CGUAUAA       --UGCA   AG      GG -          C   -      AAA |
Stem-loop sequence | GCCAACACGAGGCAUUUCUAUUGCUCACUCUUUCUCAAGGGCUUCUAGCAUUGCCAGUAACAAAAUGGCAAGCUCGAAGUCUUUGGGGAGAGUGGACAAACGUUGUCUCGAAUAUGC |
1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |