| ncRNA ID | vvi-miR3623-3p |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | chr18:24650012-24650140 [+] |
| Reference genome | Genoscope-20100122 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 92 - UGGUGCUUGGACGAAUUUGCUA - 113 |
| Stem-loop(if miRNA) |
U A CA A UAAAGCUCAAAC AC C AAGAAUUU GAUG UCUU CAAGUUC UCCAAGCACCAUC AGGCCU GGUUUU U |||||||| |||| |||| ||||||| ||||||||||||| |||||| |||||| UUCUUGAA UUAC AGAA GUUUAAG AGGUUCGUGGUAG UUCGGA UCAAAA U - A UC C ------UACUUA -- C |
| Stem-loop sequence | AAGAAUUUUGAUGAUCUUCACAAGUUCAUCCAAGCACCAUCUAAAGCUCAAACAGGCCUACGGUUUUCUUCAAAACUAGGCUUAUUCAUGAUGGUGCUUGGACGAAUUUGCUAAGAACAUUAAGUUCUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA152405.1 |
|
2.5 | TSA: Vitis vinifera Locus_9031_Transcript_4/5_Confidence_0.500.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA152404.1 |
|
2.5 | TSA: Vitis vinifera Locus_9031_Transcript_2/5_Confidence_0.667.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA152403.1 |
|
2.5 | TSA: Vitis vinifera Locus_9031_Transcript_1/5_Confidence_0.583.Vivi mRNA sequence | NA | coding protein | psRNATarget |
| 1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |