| ncRNA ID | vvi-miR394b |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | chr18:1413038-1413130 [-] |
| Reference genome | Genoscope-20100122 |
| Source | miRBase |
| Length | 20 |
| Mature sequence(if miRNA) | 64 - UUGGCAUUCUGUCCACCUCC - 83 |
| Stem-loop(if miRNA) |
- -A U C - UCUCUU UC ACAGAGUUU UUGGCA U UGUCCACCUCC CA GAAAA U ||||||||| |||||| | ||||||||||| || ||||| UGUCUCGAA AACCGU A ACGGGUGGAGG GU CUUUU C U CC C U U --CUCU CU |
| Stem-loop sequence | ACAGAGUUUAUUGGCAUUCUGUCCACCUCCCAUCUCUUGAAAAUCUCUCUUUUCUCUCUGUGGAGGUGGGCAUACUGCCAACCAAGCUCUGUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_010657682.2 |
|
1.0 | PREDICTED: Vitis vinifera F-box only protein 6 (LOC100242085), mRNA | NA | coding protein | psRNATarget |
| 1 | PMID:17721507
"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla"; Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyere C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro F, Anthouard V, Vico V, Del Fabbro C, Alaux M, Di Gaspero G, Dumas V, Felice N, Paillard S, Juman I, Moroldo M, Scalabrin S, Canaguier A, Le Clainche I, Malacrida G, Durand E, Pesole G, Laucou V, Chatelet P, Merdinoglu D, Delledonne M, Pezzotti M, Lecharny A, Scarpelli C, Artiguenave F, Pe ME, Valle G, Morgante M, Caboche M, Adam-Blondon AF, Weissenbach J, Quetier F, Wincker P; Nature. 449:463-467(2007). |