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BaseInfo

ncRNA ID vvi-miR3638-3p
Species Vitis vinifera
Class miRNA
Genome position chr17:7119929-7120133 [-]
Reference genome Genoscope-20100122
Source miRBase
Length 24
Mature sequence(if miRNA) 63 - GCAACAAGCAUGAAAAGGCACACC - 86
Stem-loop(if miRNA)           A            C         -                   G                      C                   AUAUAU
AUAUAAUGAU AAUAAUAAACUG UGUAACUAC UUUAUUUUUUGUUUGCCUU GGUGCUUUGGUGUGCCUUUUCG GCUUGUUGCUAAUAUAUAU      A
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UAUAUUACUA UUAUUAUUUGAC ACAUUGAUG AAAUAAAAAACAAACGGGA CCACGAAACCACACGGAAAAGU CGAACAACGAUUAUAUAUA      G
          C            A         G                   G                      A                   AAAACG
Stem-loop sequence AUAUAAUGAUAAAUAAUAAACUGCUGUAACUACUUUAUUUUUUGUUUGCCUUGGGUGCUUUGGUGUGCCUUUUCGCGCUUGUUGCUAAUAUAUAUAUAUAUAGGCAAAAAUAUAUAUUAGCAACAAGCAUGAAAAGGCACACCAAAGCACCGAGGGCAAACAAAAAAUAAAGGUAGUUACAACAGUUUAUUAUUCAUCAUUAUAU

Reference

1 PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis";
Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J;
Plant J. 62:960-976(2010).