| ncRNA ID | vvi-miR3630-5p |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | chr17:6897444-6897545 [+] |
| Reference genome | Genoscope-20100122 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 12 - UGCAAGUGACGAUAUCAGACA - 32 |
| Stem-loop(if miRNA) |
G -- U C A AGA -- G -C CAGUAUG UUGUGCA AG GA GAU UC CAGGGACA UCA CA CUCCA ||||||| ||||||| || || ||| || |||||||| ||| || ||||A GUUAUAC AACACGU UC CU CUA AG GUUUCUGU AGU GU GAGGU G AG U - - --G UU A AA |
| Stem-loop sequence | CAGUAUGGUUGUGCAAGUGACGAUAUCAGACAGGGACAUCAGCACCUCCAAUGGAGAAUGAUGAUUUGUCUUUGGGAAUCUCUCUGAUGCACAAGCAUAUUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA149912.1 |
|
0.0 | TSA: Vitis vinifera Locus_1264_Transcript_2/5_Confidence_0.667.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA149913.1 |
|
0.0 | TSA: Vitis vinifera Locus_1264_Transcript_4/5_Confidence_0.667.Vivi mRNA sequence | NA | coding protein | psRNATarget |
| 1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |