Search result

BaseInfo

ncRNA ID vvi-miR3634-3p
Species Vitis vinifera
Class miRNA
Genome position chr17:5681205-5681313 [-]
Reference genome Genoscope-20100122
Source miRBase
Length 23
Mature sequence(if miRNA) 23 - UUUCCGACUCGCACUCAUGCCGU - 45
Stem-loop(if miRNA)     U     UU G       U       AU      --        -AA   GU
AGGG GGAGU  U UGAAGCU AUGGCAU  GUGUGA  CGGAAAGA   GGU  U
|||| |||||  | ||||||| |||||||  ||||||  ||||||||   |||
UCCC CCUCA  A ACUUUGG UGCCGUA  CACGCU  GCCUUUCU   CUA  U
    U     CU G       U       CU      CA        GUA   AA
Stem-loop sequence AGGGUGGAGUUUUGUGAAGCUUAUGGCAUAUGUGUGACGGAAAGAAAGGUGUUUAAAUCAUGUCUUUCCGACUCGCACUCAUGCCGUUGGUUUCAGAUCACUCCUCCCU

Reference

1 PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis";
Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J;
Plant J. 62:960-976(2010).