ncRNA ID | vvi-miR3634-5p |
Species | Vitis vinifera |
Class | miRNA |
Genome position | chr17:5681205-5681313 [-] |
Reference genome | Genoscope-20100122 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 65 - GGCAUAUGUGUGACGGAAAGA - 85 |
Stem-loop(if miRNA) |
    U     UU G       U       AU      --        -AA   GU AGGG GGAGU  U UGAAGCU AUGGCAU  GUGUGA  CGGAAAGA   GGU  U |||| |||||  | ||||||| |||||||  ||||||  ||||||||   ||| UCCC CCUCA  A ACUUUGG UGCCGUA  CACGCU  GCCUUUCU   CUA  U     U     CU G       U       CU      CA        GUA   AA |
Stem-loop sequence | AGGGUGGAGUUUUGUGAAGCUUAUGGCAUAUGUGUGACGGAAAGAAAGGUGUUUAAAUCAUGUCUUUCCGACUCGCACUCAUGCCGUUGGUUUCAGAUCACUCCUCCCU |
1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |