ncRNA ID | vvi-miR3633a-5p |
Species | Vitis vinifera |
Class | miRNA |
Genome position | chr17:5521907-5522061 [+] |
Reference genome | Genoscope-20100122 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 32 - GGAAUGGAUGGUUAGGAGAG - 51 |
Stem-loop(if miRNA) |
    U      UGAAU           AA    -     A    -      AG    CCUCUUAUA       U       UC GAAA GGGAGA     AUUUCGAAAGC  UAGG AAUGG UGGU UAGGAG  AACU         UAUUUCU CAUCUUC  C |||| ||||||     |||||||||||  |||| ||||| |||| ||||||  ||||         ||||||| ||||||| CUUU CCCUCU     UAAAGCUUUUG  AUCC UUACC ACCA AUCCUU  UUGA         GUGAAGG GUAGAGG  G     U      ---UU           GC    C     C    U      GG    --------C       U       CC |
Stem-loop sequence | GAAAUGGGAGAUGAAUAUUUCGAAAGCAAUAGGAAUGGAUGGUUAGGAGAGAACUCCUCUUAUAUAUUUCUUCAUCUUCUCCGCCGGAGAUGUGGAAGUGCAGUUGGUUCCUAUACCACCCAUUCCCUACGGUUUUCGAAAUUUUCUCCCUUUUC |
1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |