ncRNA ID | vvi-miR3633b-3p |
Species | Vitis vinifera |
Class | miRNA |
Genome position | chr17:5521567-5521678 [+] |
Reference genome | Genoscope-20100122 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 79 - GUUCCCAUGCCAUCCAUUCCUA - 100 |
Stem-loop(if miRNA) |
      AG  CC               -     U     ---    --CUU      A UCCCGG  GC  AUGGGAAUGGGUGGC UGGGA CUAAU   GUUU     CACAUC U ||||||  ||  ||||||||||||||| ||||| |||||   ||||     |||||| G AGGGCC  UG  UAUCCUUACCUACCG ACCCU GGUUG   CGAA     GUGUAG U       CU  -C               U     U     AGU    AAACU      A |
Stem-loop sequence | UCCCGGAGGCCCAUGGGAAUGGGUGGCUGGGAUCUAAUGUUUCUUCACAUCAUGUAGAUGUGUCAAAAAGCUGAGUUGGUUCCCAUGCCAUCCAUUCCUAUCGUUCCCGGGA |
1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |