ncRNA ID | vvi-miR3637-3p |
Species | Vitis vinifera |
Class | miRNA |
Genome position | chr16:20659651-20659852 [-] |
Reference genome | Genoscope-20100122 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 43 - UUUCGACAAGACACAAUGCAUAAA - 66 |
Stem-loop(if miRNA) |
U    UG   A   U  GA    U                                                UGU       GUUUGAUUUUGAAACUGACA  GACA  AUG CAU AU  GUAA AUUUUAUAAAAUUAAGGGUAUUUAUGUAUUGUGUUUUGUCGGAAAAUA   UUGGAUA                    U  ||||  ||| ||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||                    U  CUGU  UAC GUA UG  UAUU UAAAAUAUUUUAAUUCUCGUAAAUACGUAACACAGAACAGCUUUUUAU   CAUAAUA                    A G    GU   C   -  AG    -                                                ---       GGUUAUUAUGUCAGCCUUAU |
Stem-loop sequence | UGACAUGAUGACAUUAUGAGUAAUAUUUUAUAAAAUUAAGGGUAUUUAUGUAUUGUGUUUUGUCGGAAAAUAUGUUUGGAUAGUUUGAUUUUGAAACUGACAUUAUAUUCCGACUGUAUUAUUGGAUAAUACUAUUUUUCGACAAGACACAAUGCAUAAAUGCUCUUAAUUUUAUAAAAUUUAUGAGUAUGCCAUUGUGUCG |
1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |