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BaseInfo

ncRNA ID	vvi-miR3636-3p
Species	Vitis vinifera
Class	miRNA
Genome position	chr16:5414826-5414966 [-]
Reference genome	Genoscope-20100122
Source	miRBase
Length	24
Mature sequence(if miRNA)	20 - GUCUGUCGGAGAAGCAAGUCGGAG - 43
Stem-loop(if miRNA)	UC  AUA         GU                 U      ---U     AUG       G UAAUUUAUUUG  GA   GACUCUUCG  UUGCUUCUUUGAUAGAU CAGUGA    AUGUC   UAAUUUU U |||||||||||  ||   |||||||||  ||||||||||||||||| ||||||    |||||   ||||||| GUUAAGUAGAC  CU   CUGAGAGGC  AACGAAGAGGCUGUCUG GUCAUU    UACAG   AUUAAAA U            UU  ---         UG                 U      UAUU     -GA       C
Stem-loop sequence	UAAUUUAUUUGUCGAAUAGACUCUUCGGUUUGCUUCUUUGAUAGAUUCAGUGAUAUGUCAUGUAAUUUUGUUCAAAAUUAAGGACAUUUAUUUACUGUGUCUGUCGGAGAAGCAAGUCGGAGAGUCUCUUCAGAUGAAUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA148189.1	ncRNA:24   GAGGCUGAACGAAGAGGCUGUCUG   1   |||||||||||||||||||||||= targets:2428   CUCCGACUUGCUUCUCCGACAGAU   2451 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_14406_Transcript_5/5_Confidence_0.583.Vivi mRNA sequence	NA	coding protein	psRNATarget

Reference

1	PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010).