ncRNA ID | vvi-miR3627-3p |
Species | Vitis vinifera |
Class | miRNA |
Genome position | chr14:28302547-28302693 [-] |
Reference genome | Genoscope-20100122 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 38 - UCGCCGCUCUCCUGUGACAAG - 58 |
Stem-loop(if miRNA) |
GA   AAA    -   A --AA           -    U                A    AC     -      UAG   AGG   GCGA GAA G    AGAGGGGUUGG GGGU UCUUGUCGCAGGAGAG CGGC  UUGCU CUUGUG   C   |||   |||| ||| |    ||||||||||| |||| |||||||||||||||| ||||  ||||| ||||||   UCC   CGCU CUU C    UUUCUUCGACU CCCA AGAACAGUGUCCUCUC GCCG  AACGG GAACGU   A CA   ---    U   A AUCC           U    U                -    CU     C      UAA |
Stem-loop sequence | GAAGGAAAGCGAGAAAGAAAGAGGGGUUGGGGGUUUCUUGUCGCAGGAGAGACGGCACUUGCUCUUGUGUAGCAAAUUGCAAGCGGCAAUCGCCGCUCUCCUGUGACAAGAUACCCUUCAGCUUCUUUCCUACAUUCUUCGCCCUAC |
1 | PMID:20230504
"Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010). |