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BaseInfo

ncRNA ID	vvi-miR3632-5p
Species	Vitis vinifera
Class	miRNA
Genome position	chr14:23394870-23395028 [+]
Reference genome	Genoscope-20100122
Source	miRBase
Length	22
Mature sequence(if miRNA)	45 - GGAUUGGGGGCCGAUGGAAAGG - 66
Stem-loop(if miRNA)	-     A UA      GA UG  A AA        G C   -        C GAU       -   CCUAA     U GUGUAG GAGAA G  AAGGGA  G  AG G  UGGGGAGC U UGG AUUGGGGG C   GGAAAGG GUC     ACAUU G |||||| ||||| |  ||||||  |  || |  |||||||| | ||| |||||||| |   ||||||| |||     ||||| UACGUC CUCUU C  UUCCCU  C  UC C  ACCCUUCG A ACC UAACCCCC G   CCUUUCC UAG     UGUAG A       U     C --      AC CU  - --        G A   A        A -AC       A   AAGUG     A
Stem-loop sequence	GUGUAGGAGAAAGUAAAGGGAGAGUGAGAGAAUGGGGAGCGUCUGGAUUGGGGGCCGAUGGAAAGGGUCCCUAAACAUUUGAAGAUGUGUGAAGAUACCUUUCCCAGACCCCCAAUACCAAAGGCUUCCCACCUUCCCAUCCCUUCCUUCUCUCUGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA144509.1	ncRNA:22   GGAAAGGUAGCCGGGGGUUAGG   1   |||||||||||||||||||||| targets:334   CCUUUCCAUCGGCCCCCAAUCC   355 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_27742_Transcript_4/5_Confidence_0.182.Vivi mRNA sequence	NA	coding protein	psRNATarget

Reference

1	PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis"; Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J; Plant J. 62:960-976(2010).