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BaseInfo

ncRNA ID ath-miRf10270-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUGCUCGACCUGGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)     G           GU       UG -U  A  G A
GAGG CACUCGACCUC  GGUCGAG  G  GA GU A G
|||| |||||||||||  |||||||  |  || || | U
CUCU GUGAGCUGGGG  CCAGCUC  C  CU UA U G
    G           GU       GU UC  G  G G
Stem-loop sequence GAGGGCACUCGACCUCGUGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCCUCUGCUCGACCUGGGGGUCGAGUGGUCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_103391.1
ncRNA:25   UGGUGAGCUGGGGGUCCAGCUCGUC   1
  ||||||||||||||||||||||=||
targets:1103   ACCACUCGACCCCCAGGUCGAGUAG   1127

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
EF183194.1
ncRNA:25   UGGUGAGCUGGGGGUCCAGCUCGUC   1
  |||||||||||*||||||||||=||
targets:448   ACCACUCGACCACCAGGUCGAGUAG   472

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
BT025674.1
ncRNA:25   UGGUGAGCUGGGGGUCCAGCUCGUC   1
  *|=|||||||||||||||||||=|*
targets:186   UCUACUCGACCCCCAGGUCGAGUAA   210

2.5 Arabidopsis thaliana NA coding protein psRNATarget