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BaseInfo

ncRNA ID	ath-miRf10268-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - GACACUCAACCUCAUGGUCGAGUG - NA
Stem-loop(if miRNA)	G A           UG     C     -A      CGA  G   UC   -AGA           CAGAU GAU A GUCACUCGGCU  GGGGU GAGUG  UGUGAU   GU GUG  AGA    UACUCGACUUC     U ||| | |||||||||||  ||||| |||||  ||||||   || |||  |||    |||||||||||     G CUA U UAGUGAGCUGG  CUCCA CUCAC  ACAUUG   UA UAU  UCU    GUGAGCUGGAG     A    G G           UA     A     AG      AGG  G   --   GGUG           CAGUG
Stem-loop sequence	GAUGAAGUCACUCGGCUUGGGGGUCGAGUGAUGUGAUCGAGUGGUGUCAGAAGAUACUCGACUUCCAGAUUGAGUGACGAGGUCGAGUGGUGGUCUUAUGAUGGAGUUACAGACACUCAACCUCAUGGUCGAGUGAUGUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   ||||||||||||||||*||||||| targets:517   CACUCGACCAUGAGGUCGAGUGUC   540 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   ||||||||||*|||||*||||||| targets:1151   CACUCGACCACGAGGUCGAGUGUC   1174 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_001336362.1	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   *|||-|||||*|||*||||||||| targets:2872   AACU-GACCAAGAGAUUGAGUGUC   2894 Target Full Sequence	2.5	Arabidopsis thaliana glucan synthase-like 3 (GSL03), mRNA	glucan synthase-like 3(GSL03)	coding protein	psRNATarget
NM_001336363.1	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   *|||-|||||*|||*||||||||| targets:3043   AACU-GACCAAGAGAUUGAGUGUC   3065 Target Full Sequence	2.5	Arabidopsis thaliana glucan synthase-like 3 (GSL03), mRNA	glucan synthase-like 3(GSL03)	coding protein	psRNATarget
NM_179847.3	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   *|||-|||||*|||*||||||||| targets:3046   AACU-GACCAAGAGAUUGAGUGUC   3068 Target Full Sequence	2.5	Arabidopsis thaliana glucan synthase-like 3 (GSL03), mRNA	glucan synthase-like 3(GSL03)	coding protein	psRNATarget
NM_001336361.1	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   *|||-|||||*|||*||||||||| targets:3118   AACU-GACCAAGAGAUUGAGUGUC   3140 Target Full Sequence	2.5	Arabidopsis thaliana glucan synthase-like 3 (GSL03), mRNA	glucan synthase-like 3(GSL03)	coding protein	psRNATarget
NM_001202724.2	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   *|||-|||||*|||*||||||||| targets:3406   AACU-GACCAAGAGAUUGAGUGUC   3428 Target Full Sequence	2.5	Arabidopsis thaliana glucan synthase-like 3 (GSL03), mRNA	glucan synthase-like 3(GSL03)	coding protein	psRNATarget
NM_111813.4	ncRNA:24   GUGAGCUGGUACUCCAACUCACAG   1   *=**=*|=|||||||||||||||= targets:1128   AGGAUAAUCAUGAGGUUGAGUGUU   1151 Target Full Sequence	3.0	Arabidopsis thaliana CRINKLY4 related 1 (CCR1), mRNA	CRINKLY4 related 1(CCR1)	coding protein	psRNATarget