| ncRNA ID | vvi-miR398a |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | chr1:731608-731710 [+] |
| Reference genome | Genoscope-20100122 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 73 - UGUGUUCUCAGGUCACCCCUU - 93 |
| Stem-loop(if miRNA) |
--ACA A GC CG U C CAA CCCCAAGGG GUG ACCUGAGAACAC G UGUGUUGGCUG GC G ||||||||| ||| |||||||||||| | ||||||||||| || GGGGUUUCC CAC UGGACUCUUGUG U ACGUAAUCGAU CG C ACCAC C -- UU U - UCU |
| Stem-loop sequence | ACACCCCAAGGGAGUGGCACCUGAGAACACCGGUUGUGUUGGCUGCGCCAAGCUCUGCUAGCUAAUGCAUUUUGUGUUCUCAGGUCACCCCUUUGGGGCACCA |
| 1 | PMID:17721507
"The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla"; Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyere C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro F, Anthouard V, Vico V, Del Fabbro C, Alaux M, Di Gaspero G, Dumas V, Felice N, Paillard S, Juman I, Moroldo M, Scalabrin S, Canaguier A, Le Clainche I, Malacrida G, Durand E, Pesole G, Laucou V, Chatelet P, Merdinoglu D, Delledonne M, Pezzotti M, Lecharny A, Scarpelli C, Artiguenave F, Pe ME, Valle G, Morgante M, Caboche M, Adam-Blondon AF, Weissenbach J, Quetier F, Wincker P; Nature. 449:463-467(2007). |
| 2 | PMID:19939267
"High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera"; Mica E, Piccolo V, Delledonne M, Ferrarini A, Pezzotti M, Casati C, Del Fabbro C, Valle G, Policriti A, Morgante M, Pesole G, Pe ME, Horner DS; BMC Genomics. 10:558(2009). |