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BaseInfo

ncRNA ID rco-miR319a
Species Ricinus communis
Class miRNA
Genome position 30190:3280054-3280264 [-]
Reference genome TIGR0.1
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - UUGGACUGAAGGGAGCUCCCU - 26
Stem-loop(if miRNA) --UU   A     UU          CUC     U   GG            A -  G   AC       UC  --AAUA    -- UUAAAAAGUUCAGAAAACAAAA
    AAG GAGCU  CUUCAGUCCA   AUGGG GGC  UAGGAUUUAAUU G CU CCG  UCAUUCA  CA      CUGA  G                      G
    ||| |||||  ||||||||||   ||||| |||  |||||||||||| | || |||  |||||||  ||      ||||  |                      G
    UUC CUCGA  GAAGUCAGGU   UGUCC UCG  AUUCUAAGUUAA C GA GGC  AGUAAGU  GU      CCCA  U                      G
UCAU   C     GG          UCA     U   -A            A A  G   GU       GA  AAAUGA    UU GGAAGAAAAGAUGUCGUGGGCG
Stem-loop sequence UUAAGAGAGCUUUCUUCAGUCCACUCAUGGGUGGCGGUAGGAUUUAAUUAGCUGCCGACUCAUUCAUCCAAAUACUGAGUUAAAAAGUUCAGAAAACAAAAGGGGCGGGUGCUGUAGAAAAGAAGGUUUACCCAGUAAAUGAGUGAAUGAUGCGGGAGACAAAUUGAAUCUUAAGCUUCCUGUACUUGGACUGAAGGGAGCUCCCUUUACU

Reference

1 PMID:19942686
"Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants";
Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M;
Nucleic Acids Res. 38:981-995(2010).