ncRNA ID | rco-miR319a |
Species | Ricinus communis |
Class | miRNA |
Genome position | 30190:3280054-3280264 [-] |
Reference genome | TIGR0.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 6 - UUGGACUGAAGGGAGCUCCCU - 26 |
Stem-loop(if miRNA) |
--UU   A     UU          CUC     U   GG            A -  G   AC       UC  --AAUA    -- UUAAAAAGUUCAGAAAACAAAA     AAG GAGCU  CUUCAGUCCA   AUGGG GGC  UAGGAUUUAAUU G CU CCG  UCAUUCA  CA      CUGA  G                      G     ||| |||||  ||||||||||   ||||| |||  |||||||||||| | || |||  |||||||  ||      ||||  |                      G     UUC CUCGA  GAAGUCAGGU   UGUCC UCG  AUUCUAAGUUAA C GA GGC  AGUAAGU  GU      CCCA  U                      G UCAU   C     GG          UCA     U   -A            A A  G   GU       GA  AAAUGA    UU GGAAGAAAAGAUGUCGUGGGCG |
Stem-loop sequence | UUAAGAGAGCUUUCUUCAGUCCACUCAUGGGUGGCGGUAGGAUUUAAUUAGCUGCCGACUCAUUCAUCCAAAUACUGAGUUAAAAAGUUCAGAAAACAAAAGGGGCGGGUGCUGUAGAAAAGAAGGUUUACCCAGUAAAUGAGUGAAUGAUGCGGGAGACAAAUUGAAUCUUAAGCUUCCUGUACUUGGACUGAAGGGAGCUCCCUUUACU |
1 | PMID:19942686
"Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010). |