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BaseInfo

ncRNA ID	rco-miR398a
Species	Ricinus communis
Class	miRNA
Genome position	30174:3280015-3280105 [+]
Reference genome	TIGR0.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	66 - UGUGUUCUCAGGUCACCCCUU - 86
Stem-loop(if miRNA)	--       A    CUC            C     U   CU  -  C   CCAGAGG GUGG   CCUGAGAACACA GUGCA UGG  CU CA C   ||||||| ||||   |||||||||||| ||||| |||  || || U   GGUUUCC CACU   GGACUCUUGUGU CACGU ACC  GA GU U GG       C    ---            C     C   UU  U  U
Stem-loop sequence	CCAGAGGAGUGGCUCCCUGAGAACACACGUGCAUUGGCUCUCACCUUUUGUAGUUCCACUGCACCUGUGUUCUCAGGUCACCCCUUUGGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002520567.2	ncRNA:21   UUCCCCACUGGACUCUUGUGU   1   =||||||*|||||||||||=| targets:1533   GAGGGGUUACCUGAGAACAUA   1553 Target Full Sequence	2.5	PREDICTED: Ricinus communis selenium-binding protein 1 (LOC8270556), mRNA	selenium-binding protein 1(LOC8270556)	coding protein	psRNATarget

Reference

1	PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010).