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BaseInfo

ncRNA ID rco-miR390a
Species Ricinus communis
Class miRNA
Genome position 30113:921964-922071 [+]
Reference genome TIGR0.1
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - AAGCUCAGGAGGGAUAGCGCC - 26
Stem-loop(if miRNA) --    U          G           -       CAUUG      -UA    C
  CUGU AAGCUCAGGA GGAUAGCGCCG UGAAGAU     AUAUAU   UUGU C
  |||| |||||||||| ||||||||||| |||||||     ||||||   ||||
  GACA UUUGAGUCCU CCUAUCGCGGU AUUUCUG     UGUAUA   AACA A
UG    C          A           G       --AUA      CAA    A
Stem-loop sequence CUGUUAAGCUCAGGAGGGAUAGCGCCGUGAAGAUCAUUGAUAUAUUAUUGUCCAAACAAAACAUAUGUAUAGUCUUUAGUGGCGCUAUCCAUCCUGAGUUUCACAGGU

Reference

1 PMID:19942686
"Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants";
Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M;
Nucleic Acids Res. 38:981-995(2010).