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BaseInfo

ncRNA ID rco-miR319b
Species Ricinus communis
Class miRNA
Genome position 29932:22062-22240 [+]
Reference genome TIGR0.1
Source miRBase
Length 21
Mature sequence(if miRNA) 154 - UUGGACUGAAGGGAGCUCCCU - 174
Stem-loop(if miRNA) --AA  A                   UC  A       GAG       ACU     G U AC       U       CU    A  AUCAA
    GA GGAGCUCUCUUCAGUCCAG  CA GGCGGUU   GGCUGGG   UAGCU C G  UCGUUGG UCAAGAG  CAUC UC     U
    || |||||||||||||||||||  || |||||||   |||||||   ||||| | |  ||||||| |||||||  |||| ||
    CU CCUCGAGGGAAGUCAGGUU  GU CUGUCGG   UUGACUU   GUCGA G C  AGCAACC AGUUUUU  GUAG AG     G
UAAC  C                   CU  A       -UA       -GU     G U GA       U       CU    -  AAUGU
Stem-loop sequence AAGAAGGAGCUCUCUUCAGUCCAGUCCAAGGCGGUUGAGGGCUGGGACUUAGCUGCUGACUCGUUGGUUCAAGAGCUCAUCAUCAUCAAUGUGUAAGAGAUGUCUUUUUGAUCCAACGAAGCUGGAGCUGUGUUCAGUUAUGGCUGUCAUGUCUUGGACUGAAGGGAGCUCCCUCCAAU

Reference

1 PMID:19942686
"Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants";
Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M;
Nucleic Acids Res. 38:981-995(2010).