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BaseInfo

ncRNA ID	rco-miR398b
Species	Ricinus communis
Class	miRNA
Genome position	29868:166476-166601 [-]
Reference genome	TIGR0.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	6 - UGUGUUCUCAGGUCGCCCCUG - 26
Stem-loop(if miRNA)	--CUA    A            U      --U       CUU  C    -UAU    UUAUCAUCU      CAGG GCGACCUGAGAA CACAUG   GGACAUU   AG UAUA    ACCC         U      |||| |||||||||||| ||||||   |||||||   || ||||    ||||      GUCC CGCUGGACUCUU GUGUAC   CUUGUGG   UC AUGU    UGGG         C GGGCC    C            -      UUU       -UU  -    UAUU    UUUUAUUCU
Stem-loop sequence	CUACAGGAGCGACCUGAGAAUCACAUGUGGACAUUCUUAGCUAUAUAUACCCUUAUCAUCUUCUCUUAUUUUGGGUUUAUUGUACUUUGGUGUUCUUUCAUGUGUUCUCAGGUCGCCCCUGCCGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002527082.2	ncRNA:21   GUCCCCGCUGGACUCUUGUGU   1   ||*|||||||||||*|||||| targets:25   CAAGGGCGACCUGAAAACACA   45 Target Full Sequence	2.5	PREDICTED: Ricinus communis laccase-14 (LOC8281429), mRNA	laccase-14(LOC8281429)	coding protein	psRNATarget

Reference

1	PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010).