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BaseInfo

ncRNA ID	rco-miR171b
Species	Ricinus communis
Class	miRNA
Genome position	29842:404395-404485 [+]
Reference genome	TIGR0.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	66 - UUGAGCCGUGCCAAUAUCACG - 86
Stem-loop(if miRNA)	--     A        UG             G U  -UU      U   GUACG GAUAUUGG  CGGUUCAAUCAGA A CA   GCUCUA A   ||||| ||||||||  ||||||||||||| | ||   ||||||   CGUGC CUAUAACC  GCCGAGUUAGUUU U GU   CGAGAU U UA     A        GU             G U  UUU      A
Stem-loop sequence	GUACGAGAUAUUGGUGCGGUUCAAUCAGAGAUCAUUGCUCUAUAUAUAGAGCUUUUGUUGUUUGAUUGAGCCGUGCCAAUAUCACGUGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002511615.2	ncRNA:21   GCACUAUAACCGUGCCGAGUU   1   *|*|||||||||=|||||||| targets:1719   AGGGAUAUUGGCGCGGCUCAA   1739 Target Full Sequence	2.5	PREDICTED: Ricinus communis scarecrow-like protein 6 (LOC8265856), mRNA	scarecrow-like protein 6(LOC8265856)	coding protein	psRNATarget
XM_015725220.1	ncRNA:21   GCACUAUAACCGUGCCGAGUU   1   *|*|||||||||=|||||||| targets:2149   AGGGAUAUUGGCGCGGCUCAA   2169 Target Full Sequence	2.5	PREDICTED: Ricinus communis scarecrow-like protein 27 (LOC8265567), mRNA	scarecrow-like protein 27(LOC8265567)	coding protein	psRNATarget

Reference

1	PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010).