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BaseInfo

ncRNA ID ath-miRf10261-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UCGCAAAUUUGCGAGGGAGUUGCG - NA
Stem-loop(if miRNA)     CA  GA   U                   GACG           ACUG    G
UAUG  AC  GCA UUCCCUCGCAAAUUUGCGA    UUUGCGAGGAA    CGUG A
||||  ||  ||| |||||||||||||||||||    |||||||||||    |||| A
AUAC  UG  CGU GAGGGAGCGUUUAAACGCU    AAACGCUUCUU    GCAC A
    AA  AG   U                   ACAA           ---A    G
Stem-loop sequence UAUGCAACGAGCAUUUCCCUCGCAAAUUUGCGAGACGUUUGCGAGGAAACUGCGUGGAAAGCACGAUUCUUCGCAAAAACAUCGCAAAUUUGCGAGGGAGUUGCGAGUAACAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_113908.1
ncRNA:24   GCGUUGAGGGAGCGUUUAAACGCU   1
  |||||**|||||||||||||||||
targets:789   CGCAAAGCCCUCGCAAAUUUGCGA   812

2.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget
NM_113908.1
ncRNA:24   GCGUUGAGGGAGCGUUUAAACGCU   1
  |||||**|||||||||||||||||
targets:1070   CGCAAAGCCCUCGCAAAUUUGCGA   1093

2.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget
NM_113908.1
ncRNA:24   GCGUUGAGGGAGCGUUUAAACGCU   1
  |||||=|*=|||||||||||||||
targets:1132   CGCAAUUGUCUCGCAAAUUUGCGA   1155

3.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G29796) coding protein psRNATarget