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BaseInfo

ncRNA ID rco-miR390b
Species Ricinus communis
Class miRNA
Genome position 29820:153671-153792 [+]
Reference genome TIGR0.1
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - AAGCUCAGGAGGGAUAGCGCC - 26
Stem-loop(if miRNA) -     -          G         C     -U     ---------U   UUUUUAUGAAUAU
 CUAAU AAGCUCAGGA GGAUAGCGC AUGGA  GGAUA          GUG             G
 ||||| |||||||||| ||||||||| |||||  |||||          |||
 GGUUA UUUGAGUCCU CCUAUCGCG UAUCU  UCUAU          CGG             A
U     C          A         A     UC     UUUUUUCGUU   UUCUUUUCUGCUC
Stem-loop sequence CUAAUAAGCUCAGGAGGGAUAGCGCCAUGGAUGGAUAUGUGUUUUUAUGAAUAUGACUCGUCUUUUCUUGGCUUGCUUUUUUUAUCUCUUCUAUAGCGCUAUCCAUCCUGAGUUUCAUUGGU

Reference

1 PMID:19942686
"Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants";
Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M;
Nucleic Acids Res. 38:981-995(2010).