ncRNA ID | rco-miR395c |
Species | Ricinus communis |
Class | miRNA |
Genome position | 29736:142167-142248 [+] |
Reference genome | TIGR0.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 57 - CUGAAGUGUUUGGGGGAACUC - 77 |
Stem-loop(if miRNA) |
-    -        UG         C     -U   AAAAG  CUAG AGUUCCCU  AGCACUUCA UGGGA  GAA     G  |||| ||||||||  ||||||||| |||||  |||     U  GGUC UCAAGGGG  UUGUGAAGU AUCCU  CUU     C U    C        GU         C     UC   CUGAC |
Stem-loop sequence | CUAGAGUUCCCUUGAGCACUUCACUGGGAUGAAAAAAGGUCCAGUCUUCCUUCCUACUGAAGUGUUUGGGGGAACUCCUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015725247.1 |
|
2.0 | PREDICTED: Ricinus communis low affinity sulfate transporter 3 (LOC8265600), mRNA | low affinity sulfate transporter 3(LOC8265600) | coding protein | psRNATarget |
1 | PMID:19942686
"Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010). |