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BaseInfo

ncRNA ID rco-miR395d
Species Ricinus communis
Class miRNA
Genome position 29736:136644-136730 [-]
Reference genome TIGR0.1
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - CUGAAGUGUUUGGGGGAACUC - 26
Stem-loop(if miRNA) -    -        UG C       U         UU    AAG
 CUAG AGUUCCCU  A CACUUCA UGUGGAUUA  CUUC   C
 |||| ||||||||  | ||||||| |||||||||  ||||
 GGUC UCAAGGGG  U GUGAAGU ACAUUUGGU  GAGG   U
U    C        GU U       C         -U    AAC
Stem-loop sequence CUAGAGUUCCCUUGACCACUUCAUUGUGGAUUAUUCUUCAAGCUCAAGGAGUUGGUUUACACUGAAGUGUUUGGGGGAACUCCUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015725247.1
ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1
  ***|||||||||||||||||*
targets:368   NNNUUCCCCCAAACACUUCAA   388

2.0 PREDICTED: Ricinus communis low affinity sulfate transporter 3 (LOC8265600), mRNA low affinity sulfate transporter 3(LOC8265600) coding protein psRNATarget

Reference

1 PMID:19942686
"Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants";
Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M;
Nucleic Acids Res. 38:981-995(2010).