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BaseInfo

ncRNA ID	rco-miR164c
Species	Ricinus communis
Class	miRNA
Genome position	29718:1377-1492 [+]
Reference genome	TIGR0.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	6 - UGGAGAAGCAGGGCACGUGCA - 26
Stem-loop(if miRNA)	--  A     A    CA         CAUU      -  AUG  UAAUUGAACAUACAU   CA GAUGG GAAG  GGGCACGUG    ACUAAC UC   CA               A   || ||||| ||||  |||||||||    |||||| ||   ||   GU CUACC CUUC  CCCGUGUAC    UGAUUG AG   CG               C CA  A     C    UG         UUCU      G  -GU  UUCUUUUUACGCAUA
Stem-loop sequence	CAAGAUGGAGAAGCAGGGCACGUGCAUUACUAACUCAUGCAUAAUUGAACAUACAUACAUACGCAUUUUUCUUGCUGGAGGUUAGUUCUUCAUGUGCCCGUCUUCCCCAUCAUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002514690.2	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=|||||||||||||||||| targets:1040   CCUACGUGCCCUGCUUCUCCA   1060 Target Full Sequence	1.0	PREDICTED: Ricinus communis NAC domain-containing protein 100 (LOC8263409), mRNA	NAC domain-containing protein 100(LOC8263409)	coding protein	psRNATarget
XM_015725842.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||=|||||||||||| targets:676   AGCAAGUGUCCUGCUUCUCCA   696 Target Full Sequence	2.5	PREDICTED: Ricinus communis NAC domain-containing protein 21/22 (LOC8266284), transcript variant X2, mRNA	NAC domain-containing protein 21/22(LOC8266284)	coding protein	psRNATarget
XM_002529908.2	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||=|||||||||||| targets:682   AGCAAGUGUCCUGCUUCUCCA   702 Target Full Sequence	2.5	PREDICTED: Ricinus communis NAC domain-containing protein 21/22 (LOC8266284), transcript variant X1, mRNA	NAC domain-containing protein 21/22(LOC8266284)	coding protein	psRNATarget

Reference

1	PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010).