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BaseInfo

ncRNA ID ath-miRf10260-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GAGGUGUCGAUCGACACCAAC - NA
Stem-loop(if miRNA)   GCUC                 UC --------GGA  AGAACGCGG
GG    GGUGUCGAUCGACACCU  G           GC         A
||    |||||||||||||||||  |           ||         U
CC    CCACAGCUAGCUGUGGA  C           UU         G
  ACAA                 GA AACACAGUAAG  AUGGCUAAC
Stem-loop sequence GGGCUCGGUGUCGAUCGACACCUUCGGGAGCAGAACGCGGAUGCAAUCGGUAUUGAAUGACACAACAGAGGUGUCGAUCGACACCAACACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JA894865.1
ncRNA:21   CAACCACAGCUAGCUGUGGAG   1
  *||||||||||||||||||**
targets:81   CUUGGUGUCGAUCGACACCAG   101

2.5 Sequence 182 from Patent WO2011067745 NA coding protein psRNATarget
NM_147252.2
ncRNA:21   CAACCACAGCUAGCUGUGGAG   1
  **|||||||||||||||||**
targets:436   CCUGGUGUCGAUCGACACCAG   456

2.5 Arabidopsis thaliana transmembrane protein mRNA transmembrane protein(AT2G06095) coding protein psRNATarget
AY219108.1
ncRNA:21   CAACCACAGCUAGCUGUGGAG   1
  **|||||||||||||||||**
targets:398   CCUGGUGUCGAUCGACACCAG   418

2.5 Arabidopsis thaliana hypothetical protein (At2g06095/F5K7.25) mRNA, complete cds NA coding protein psRNATarget
DQ069810.1
ncRNA:21   CAACCACAGCUAGCUGUGG-AG   1
  *||||||||||||||||||-||
targets:208   CUUGGUGUCGAUCGACACCAUC   229

3.0 Arabidopsis thaliana At2g13270 mRNA, partial sequence NA coding protein psRNATarget