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BaseInfo

ncRNA ID	rco-miR156g
Species	Ricinus communis
Class	miRNA
Genome position	29586:129746-129842 [-]
Reference genome	TIGR0.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	72 - UUGACAGAAGAUAGAGAGCAC - 92
Stem-loop(if miRNA)	--  U  U           -         U  C  -   A     U  UG   UG UG UGACAGAAGAU AGAGAGCAC GA GA UGA AUGCA GA  G   || || ||||||||||| ||||||||| || || ||| ||||| ||   AC AC ACUGUCUUCUG UCUCUCGUG UU CU ACU UACGU CU  G CC  U  U           A         U  C  C   C     -  CA
Stem-loop sequence	UGUUGUUGACAGAAGAUAGAGAGCACUGACGAUGAAAUGCAUGAUGGGACUCUGCAUCUCACUCCUUUGUGCUCUCUAGUCUUCUGUCAUCAUCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015727314.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||| targets:1062   GUGCUCUCUCUCUUCUGUCAA   1082 Target Full Sequence	1.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 9 (LOC8277452), mRNA	squamosa promoter-binding-like protein 9(LOC8277452)	coding protein	psRNATarget
XM_015716704.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||| targets:2002   GUGCUCUCUCUCUUCUGUCAA   2022 Target Full Sequence	1.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 2 (LOC8286787), transcript variant X2, mRNA	squamosa promoter-binding-like protein 2(LOC8286787)	coding protein	psRNATarget
XM_015716703.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||| targets:2238   GUGCUCUCUCUCUUCUGUCAA   2258 Target Full Sequence	1.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 2 (LOC8286787), transcript variant X1, mRNA	squamosa promoter-binding-like protein 2(LOC8286787)	coding protein	psRNATarget
XM_002509404.2	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   *||||||||*||||||||||| targets:839   AUGCUCUCUCUCUUCUGUCAA   859 Target Full Sequence	1.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 3 (LOC8258445), mRNA	squamosa promoter-binding-like protein 3(LOC8258445)	coding protein	psRNATarget
XM_015729066.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||= targets:1315   GUGCUCUCUCUCUUCUGUCAG   1335 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 6 (LOC8264608), transcript variant X3, mRNA	squamosa promoter-binding-like protein 6(LOC8264608)	coding protein	psRNATarget
XM_015729065.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||= targets:1183   GUGCUCUCUCUCUUCUGUCAG   1203 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 6 (LOC8264608), transcript variant X2, mRNA	squamosa promoter-binding-like protein 6(LOC8264608)	coding protein	psRNATarget
XM_002512008.2	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||= targets:1310   GUGCUCUCUCUCUUCUGUCAG   1330 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 6 (LOC8264608), transcript variant X4, mRNA	squamosa promoter-binding-like protein 6(LOC8264608)	coding protein	psRNATarget
XM_015729064.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||= targets:1314   GUGCUCUCUCUCUUCUGUCAG   1334 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 6 (LOC8264608), transcript variant X1, mRNA	squamosa promoter-binding-like protein 6(LOC8264608)	coding protein	psRNATarget
XM_015727577.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||* targets:809   GUGCUCUCUCUCUUCUGUCAU   829 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 7 (LOC8265833), mRNA	squamosa promoter-binding-like protein 7(LOC8265833)	coding protein	psRNATarget
XM_015716677.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||* targets:1091   GUGCUCUCUCUCUUCUGUCAU   1111 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 16 (LOC8286773), transcript variant X2, mRNA	squamosa promoter-binding-like protein 16(LOC8286773)	coding protein	psRNATarget
XM_015723469.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||* targets:1174   GUGCUCUCUCUCUUCUGUCAU   1194 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 13A (LOC8269206), transcript variant X3, mRNA	squamosa promoter-binding-like protein 13A(LOC8269206)	coding protein	psRNATarget
XM_015723461.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||* targets:1299   GUGCUCUCUCUCUUCUGUCAU   1319 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 13A (LOC8269206), transcript variant X1, mRNA	squamosa promoter-binding-like protein 13A(LOC8269206)	coding protein	psRNATarget
XM_002511111.2	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||* targets:1327   GUGCUCUCUCUCUUCUGUCAU   1347 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 13A (LOC8269206), transcript variant X2, mRNA	squamosa promoter-binding-like protein 13A(LOC8269206)	coding protein	psRNATarget
XM_015716678.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||* targets:1383   GUGCUCUCUCUCUUCUGUCAU   1403 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 16 (LOC8286773), transcript variant X3, mRNA	squamosa promoter-binding-like protein 16(LOC8286773)	coding protein	psRNATarget
XM_015716676.1	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |||||||||*||||||||||* targets:1392   GUGCUCUCUCUCUUCUGUCAU   1412 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 16 (LOC8286773), transcript variant X1, mRNA	squamosa promoter-binding-like protein 16(LOC8286773)	coding protein	psRNATarget
XM_002517836.2	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   *||||||||*||||||||||* targets:735   UUGCUCUCUCUCUUCUGUCAU   755 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding protein 1 (LOC8269152), mRNA	squamosa promoter-binding protein 1(LOC8269152)	coding protein	psRNATarget
XM_002514579.2	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   *||||||||*||||||||||* targets:1839   CUGCUCUCUCUCUUCUGUCAU   1859 Target Full Sequence	2.5	PREDICTED: Ricinus communis squamosa promoter-binding-like protein 6 (LOC8265059), mRNA	squamosa promoter-binding-like protein 6(LOC8265059)	coding protein	psRNATarget
XM_002516804.2	ncRNA:21   CACGAGAGAUAGAAGACAGUU   1   |**|||||||||||||*|||| targets:295   GCACUCUCUAUCUUCUAUCAA   315 Target Full Sequence	2.5	PREDICTED: Ricinus communis pentatricopeptide repeat-containing protein At2g36980, mitochondrial (LOC8262370), mRNA	pentatricopeptide repeat-containing protein At2g36980, mitochondrial(LOC8262370)	coding protein	psRNATarget

Reference

1	PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010).