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BaseInfo

ncRNA ID ath-miRf10259-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UAUCUCUGCAACUGCAACUGC - NA
Stem-loop(if miRNA)                   A     A GAA    AACAGAUCU       -CAACUUUCUAU G
CAAGCAGUUGCAGUUGCA AGAUA A   CUUA         ACGUGUA            G A
|||||||||||||||||| ||||| |   ||||         |||||||            |
GUUCGUCAACGUCAACGU UCUAU U   GAGU         UGUACAU            C G
                  C     A -AA    -AAAUAAUC       AUUUCGACAAAC A
Stem-loop sequence CAAGCAGUUGCAGUUGCAAAGAUAAAGAACUUAAACAGAUCUACGUGUACAACUUUCUAUGGAGACCAAACAGCUUUAUACAUGUCUAAUAAAUGAGAAUAUAUCUCUGCAACUGCAACUGCUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001339732.1
ncRNA:21   CGUCAACGUCAACGUCUCUAU   1
  *|||||*||||||||||||*|
targets:115   ACAGUUACAGUUGCAGAGAAA   135

2.5 Arabidopsis thaliana ROTUNDIFOLIA like 7 (RTFL7), mRNA ROTUNDIFOLIA like 7(RTFL7) coding protein psRNATarget
NM_127498.3
ncRNA:21   CGUCAACGUCAACGUCUCUAU   1
  *=|*|||||||||||||||*|
targets:1904   AUAAUUGCAGUUGCAGAGAGA   1924

2.5 Arabidopsis thaliana AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein mRNA AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein(AT2G19400) coding protein psRNATarget
AF370516.1
ncRNA:21   CGUCAACGUCAACGUCUCUAU   1
  *=|*|||||||||||||||*|
targets:2019   AUAAUUGCAGUUGCAGAGAGA   2039

2.5 Arabidopsis thaliana putative protein kinase (At2g19400; F27F23.20) mRNA, complete cds NA coding protein psRNATarget