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BaseInfo

ncRNA ID	rco-miR160b
Species	Ricinus communis
Class	miRNA
Genome position	28062:1207-1302 [+]
Reference genome	TIGR0.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	6 - UGCCUGGCUCCCUGUAUGCCA - 26
Stem-loop(if miRNA)	-- GU     C       C          AA  UAG   U  U   CU   G  UAUGC UGGCUCC UGUAUGCCAC  GC   AGU CA UCC  U   |  ||||| ||||||| ||||||||||  ||   ||| || |||  C   C  AUACG ACCGAGG GCGUGCGGUG  CG   UCG GU AGG  C CU UC     A       A          GC  UUA   -  U   UA
Stem-loop sequence	GGUUAUGCCUGGCUCCCUGUAUGCCACAAGCUAGAGUUCAUUCCCUUCCAUGGAUUGGCUAUUGCCGGUGGCGUGCGAGGAGCCAAGCAUACUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002529895.2	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   *|||||||||||||||||||| targets:2084   AGGCAUACAGGGAGCCAGGCA   2104 Target Full Sequence	0.0	PREDICTED: Ricinus communis auxin response factor 18 (LOC8266270), mRNA	auxin response factor 18(LOC8266270)	coding protein	psRNATarget
XM_015716078.1	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||=|||||||||||||| targets:1659   UGGCAUGCAGGGAGCCAGGCA   1679 Target Full Sequence	1.0	PREDICTED: Ricinus communis auxin response factor 17 (LOC8262995), transcript variant X2, mRNA	auxin response factor 17(LOC8262995)	coding protein	psRNATarget
XM_002513798.2	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||=|||||||||||||| targets:1659   UGGCAUGCAGGGAGCCAGGCA   1679 Target Full Sequence	1.0	PREDICTED: Ricinus communis auxin response factor 17 (LOC8262995), transcript variant X1, mRNA	auxin response factor 17(LOC8262995)	coding protein	psRNATarget
XM_002519485.2	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||=|||||||||||||| targets:1641   UGGCAUGCAGGGAGCCAGGCA   1661 Target Full Sequence	1.0	PREDICTED: Ricinus communis auxin response factor 18 (LOC8284524), mRNA	auxin response factor 18(LOC8284524)	coding protein	psRNATarget
XM_015728306.1	ncRNA:21   AC---CGUAUGUCCCUCGGUCCGU   1   ||---||||||||||||||||||| targets:1414   UGCACGCAUACAGGGAGCCAGGCA   1437 Target Full Sequence	3.0	PREDICTED: Ricinus communis auxin response factor 16 (LOC8278088), mRNA	auxin response factor 16(LOC8278088)	coding protein	psRNATarget

Reference

1	PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants"; Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M; Nucleic Acids Res. 38:981-995(2010).