ncRNA ID | ath-miRf10258-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - CCCAUGCCUUUCUUGUGUAA - NA |
Stem-loop(if miRNA) |
   -   GAG        --       AAC UG       A  C G    -----UUUAC   CAAUAC GAC UCA   ACACGAGA  GGCAUGG   U  GCGAUGA GG A AAGC          GGU      C ||| |||   ||||||||  |||||||   |  ||||||| || | ||||          ||| CUG AGU   UGUGUUCU  CCGUACC   G  CGCUGCU CC U UUCG          UCG      U    C   AAA        UU       --C GU       -  - G    CAAUAACCCA   ACUCGG |
Stem-loop sequence | GACUCAGAGACACGAGAGGCAUGGAACUUGGCGAUGAAGGCAGAAGCUUUACGGUCAAUACCUGGCUCAGCUACCCAAUAACGCUUGUCCUCGUCGCUGGCCCAUGCCUUUCUUGUGUAAAUGACGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_180552.1 |
|
0.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT5G26620) | coding protein | psRNATarget | |||||||||
AY648334.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At3g17200) mRNA, complete cds | NA | coding protein | psRNATarget |