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BaseInfo

ncRNA ID osa-miRf12090-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UCUAGUCACCUGUGACGGGUCUA - NA
Stem-loop(if miRNA)                C         U      -     U   U     AA
CAGGUAUCUAGUCAC UGUGACGGG CUAGAA UGGAA CCG CAGAG  A
||||||||||||||| ||||||||| |||||| ||||| ||| |||||
GUCCAUAGAUCAGUG ACACUGCCC GGUCUU ACCUU GGC GUUUC  C
               A         -      C     C   U     CA
Stem-loop sequence CAGGUAUCUAGUCACCUGUGACGGGUCUAGAAUGGAAUCCGUCAGAGAAACACCUUUGUCGGCUUCCACUUCUGGCCCGUCACAAGUGACUAGAUACCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015760685.1
ncRNA:23   AUCUGGGCAGUGUCCACUGAUCU   1
  ||**|||*|||||||||||||||
targets:1892   UAACCCCAUCACAGGUGACUAGA   1914

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278577 (LOC107278577), mRNA uncharacterized LOC107278577(Os11g0574725) coding protein psRNATarget
LQ236207.1
ncRNA:23   AUCUGGGCAGUGUCCACUGAUCU   1
  |**||||||||||*||||||||*
targets:81   UCAACCCGUCACAUGUGACUAGU   103

2.5 Sequence 2202 from Patent EP2985353 NA coding protein psRNATarget
JB164538.1
ncRNA:23   AUCUGGGCAGUGUCCACUGAUCU   1
  |**||||||||||*||||||||*
targets:81   UCAACCCGUCACAUGUGACUAGU   103

2.5 Sequence 2202 from Patent EP2559767 NA coding protein psRNATarget
HI404077.1
ncRNA:23   AUCUGGGCAGUGUCCACUGAUCU   1
  |**||||||||||*||||||||*
targets:81   UCAACCCGUCACAUGUGACUAGU   103

2.5 Sequence 2202 from Patent EP2074227 NA coding protein psRNATarget