ncRNA ID | osa-miRf12087-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - CCUGGGUCCACAUGUCAGCCUCU - NA |
Stem-loop(if miRNA) |
      A                         UUUU -       AAUAAAAG CCAAAU CCACCUGGGUCCACAUGUCAGCCUC    C CCAUUCA        U |||||| |||||||||||||||||||||||||    | |||||||        G GGUUUA GGUGGGCCCGGGUGUAUAGUCGGAG    G GGUAGGU        A       C                         -UGU U       CAGGGUGC |
Stem-loop sequence | CCAAAUACCACCUGGGUCCACAUGUCAGCCUCUUUUCCCAUUCAAAUAAAAGUGACGUGGGACUGGAUGGUGUGUGAGGCUGAUAUGUGGGCCCGGGUGGCAUUUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015758485.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4348207 (LOC4348207), mRNA | uncharacterized LOC4348207(LOC4348207) | coding protein | psRNATarget | |||||||||
AK108427.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-143-A08, full insert sequence | NA | coding protein | psRNATarget |