Search result

BaseInfo

ncRNA ID osa-miRf12080-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AGAUCGAUCUUCGCAAGCGGC - NA
Stem-loop(if miRNA)     --GU    C                         UC AU
GGCG    CCGC UGCGAAGAUUGAUCUUUGCAGGCGG  C  A
||||    |||| |||||||||||||||||||||||||  |
CUGC    GGCG ACGCUUCUAGCUAGAAGCGUCCGCU  G  U
    AGAC    A                         GC AA
Stem-loop sequence GGCGGUCCGCCUGCGAAGAUUGAUCUUUGCAGGCGGUCCAUAUAAGCGUCGCCUGCGAAGAUCGAUCUUCGCAAGCGGCAGACGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164746.1
ncRNA:21   CGGCGAACGCUUCUAGCUAGA   1
  *||||||||||||||||||||
targets:113   ACCGCUUGCGAAGAUCGAUCU   133

0.0 Sequence 2410 from Patent EP2559767 NA coding protein psRNATarget
JB164746.1
ncRNA:21   CGGCGAACGCUUCUAGCUAGA   1
  *=|||*||||||||||*||||
targets:73   CUCGCCUGCGAAGAUCUAUCU   93

2.5 Sequence 2410 from Patent EP2559767 NA coding protein psRNATarget
HI404285.1
ncRNA:21   CGGCGAACGCUUCUAGCUAGA   1
  *||||||||||||||||||||
targets:113   ACCGCUUGCGAAGAUCGAUCU   133

0.0 Sequence 2410 from Patent EP2074227 NA coding protein psRNATarget
HI404285.1
ncRNA:21   CGGCGAACGCUUCUAGCUAGA   1
  *=|||*||||||||||*||||
targets:73   CUCGCCUGCGAAGAUCUAUCU   93

2.5 Sequence 2410 from Patent EP2074227 NA coding protein psRNATarget
LQ236415.1
ncRNA:21   CGGCGAACGCUUCUAGCUAGA   1
  *||||||||||||||||||||
targets:113   ACCGCUUGCGAAGAUCGAUCU   133

0.0 Sequence 2410 from Patent EP2985353 NA coding protein psRNATarget
LQ236415.1
ncRNA:21   CGGCGAACGCUUCUAGCUAGA   1
  *=|||*||||||||||*||||
targets:73   CUCGCCUGCGAAGAUCUAUCU   93

2.5 Sequence 2410 from Patent EP2985353 NA coding protein psRNATarget