Search result

BaseInfo

ncRNA ID ath-miRf10256-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GCUAUGUGUGCUCACUCUCU - NA
Stem-loop(if miRNA)       A  -                    GGCU   UU    AUUUG
GGUGAC GA AGAGAGUGAGCACACAUGGU    UUC  GCAU     A
|||||| || ||||||||||||||||||||    |||  ||||     A
CCACUG CU UCUCUCACUCGUGUGUAUCG    AAG  CGUA     G
      C  A                    ----   UU    CCUUG
Stem-loop sequence GGUGACAGAAGAGAGUGAGCACACAUGGUGGCUUUCUUGCAUAUUUGAAGGUUCCAUGCUUGAAGCUAUGUGUGCUCACUCUCUAUCCGUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JA894733.1
ncRNA:20   UCUCUCACUCGUGUGUAUCG   1
  |||||||||||||||||=||
targets:18   AGAGAGUGAGCACACAUGGC   37

1.5 Sequence 50 from Patent WO2011067745 NA coding protein psRNATarget
JA894874.1
ncRNA:20   UCUCUCACUCGUGUGUAUCG   1
  ||||||||||||||||*||*
targets:28   AGAGAGUGAGCACACAAAGG   47

2.5 Sequence 191 from Patent WO2011067745 NA coding protein psRNATarget
AK117457.1
ncRNA:20   UCUCUCACUCGUGUGUAUCG   1
  ||||||||||||||||*||*
targets:371   AGAGAGUGAGCACACAAAGG   390

2.5 Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL17-06-E12 NA coding protein psRNATarget