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BaseInfo

ncRNA ID osa-miRf12070-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CGGUUGGUAGUACCAACCGG - NA
Stem-loop(if miRNA)          C       A            -  A  A
AUCUUUACU CCGGUUG UACUACCAACUG GU CA U
||||||||| ||||||| |||||||||||| || ||
UAGAAAUGA GGCCAAC AUGAUGGUUGGC CA GU U
         A       C            U  -  U
Stem-loop sequence AUCUUUACUCCCGGUUGAUACUACCAACUGGUACAAUUUUGACUCGGUUGGUAGUACCAACCGGAAGUAAAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI404518.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  |||||||||=||||||||||
targets:54   CCGGUUGGUGCUACCAACCG   73

1.5 Sequence 2643 from Patent EP2074227 NA coding protein psRNATarget
LQ236648.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  |||||||||=||||||||||
targets:54   CCGGUUGGUGCUACCAACCG   73

1.5 Sequence 2643 from Patent EP2985353 NA coding protein psRNATarget
JB164979.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  |||||||||=||||||||||
targets:54   CCGGUUGGUGCUACCAACCG   73

1.5 Sequence 2643 from Patent EP2559767 NA coding protein psRNATarget
AK121178.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  ||||||||||=||||||||*
targets:1919   CCGGUUGGUAUUACCAACCA   1938

2.5 Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence NA coding protein psRNATarget
AK099726.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  ||||||||||*|||||||||
targets:1103   CCGGUUGGUAGUACCAACCG   1122

1.5 Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence NA coding protein psRNATarget
AK288424.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  ||||||||||*|||||||||
targets:1380   CCGGUUGGUAAUACCAACCG   1399

1.5 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget
AK061057.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  =|||||||||=||||||||*
targets:406   UCGGUUGGUAUUACCAACCA   425

2.5 Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence NA coding protein psRNATarget
AK061057.1
ncRNA:20   GGCCAACCAUGAUGGUUGGC   1
  ==||||||||*|||||||||
targets:364   UUGGUUGGUAAUACCAACCG   383

2.5 Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence NA coding protein psRNATarget