ncRNA ID | osa-miRf12068-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GCCACUUAAGCAGCCGUAUG - NA |
Stem-loop(if miRNA) |
U    C        CA          C              -----CU  UAAGAGGUCCGCAUGCAAAAAUAAGGUCAU  UUUC CAUACGGC  CUUAAGUGGC CGUAUGGGAAAAUC       CU                              U  |||| ||||||||  |||||||||| ||||||||||||||       ||                              U  AAAG GUAUGCCG  GAAUUCACCG GCAUACCUUUUUAG       GG                              U A    C        AC          A              CUAAAAA  UACGCCCGCGAAUUCACUCGGCGUACGUUU |
Stem-loop sequence | UUUUCCCAUACGGCCACUUAAGUGGCCCGUAUGGGAAAAUCCUCUUAAGAGGUCCGCAUGCAAAAAUAAGGUCAUUUUUUUGCAUGCGGCUCACUUAAGCGCCCGCAUGGAAAAAUCGAUUUUUCCAUACGAGCCACUUAAGCAGCCGUAUGCGAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288801.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090070N16, full insert sequence | NA | coding protein | psRNATarget |