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BaseInfo

ncRNA ID	osa-miRf12062-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UAGUCCCGGUUGGACAACCGGGA - NA
Stem-loop(if miRNA)	U              AU    C         AA     ----   U  CUUUAGUCCCGGUU  UUCA CCGGGACUA  GAUCU    CUA C  ||||||||||||||  |||| |||||||||  |||||    |||  GGAAUCAGGGCCAA  AGGU GGCCCUGAU  UUAGG    GAU U G              -C    U         GC     UUCU   U
Stem-loop sequence	UCUUUAGUCCCGGUUAUUUCACCCGGGACUAAAGAUCUCUAUCUUUAGUCUUGGAUUCGUAGUCCCGGUUGGACAACCGGGACUAAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242216.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   ||||||||*|||||||||||||| targets:595   UCCCGGUUUUCCAACCGGGACUA   617 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   ||||||||*|||||||||||||| targets:1295   UCCCGGUUUUCCAACCGGGACUA   1317 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK241906.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   ||=|||||*|=|||||||||||| targets:1664   UCUCGGUUUUUCAACCGGGACUA   1686 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075049G22, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   ||||||||*|*|||||||||||| targets:1285   UCCCGGUUAUACAACCGGGACUA   1307 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK100339.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   ||||||||*|||||||||||*|| targets:2038   UCCCGGUUUUCCAACCGGGAGUA   2060 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023081I19, full insert sequence	NA	coding protein	psRNATarget
XM_015759291.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   ||||||||*|||||||||||*|| targets:2037   UCCCGGUUUUCCAACCGGGAGUA   2059 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group proline-rich receptor-like protein kinase PERK4 (LOC4347953), mRNA	proline-rich receptor-like protein kinase PERK4(LOC4347953)	coding protein	psRNATarget
XM_015783628.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   ||||||||*||||||||*||||| targets:2745   UCCCGGUUUUCCAACCGAGACUA   2767 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4337524 (LOC4337524), mRNA	uncharacterized LOC4337524(LOC4337524)	coding protein	psRNATarget
AK065634.1	ncRNA:23   AGGGCCAACAGGUUGGCCCUGAU   1   |*||||||*||=||||||||||| targets:1854   UACCGGUUUUCUAACCGGGACUA   1876 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013034I10, full insert sequence	NA	coding protein	psRNATarget