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BaseInfo

ncRNA ID ath-miRf10254-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGAACCGCUGCCUCCAGCGA - NA
Stem-loop(if miRNA)      -C   CAG       U    A                    ----CU     AAA
AAGAG  AAG   CGCUGGA GCAG GGUUUAUCGAUCGAUUCUUG      UUUGU   C
|||||  |||   ||||||| |||| ||||||||||||||||||||      |||||
UUCUC  UUC   GCGACCU CGUC CCAAGUAGCUAGUUAAGGAC      AAAUA   A
     AC   --A       C    G                    ACUUAU     AAA
Stem-loop sequence AAGAGCAAGCAGCGCUGGAUGCAGAGGUUUAUCGAUCGAUUCUUGCUUUUGUAAACAAAAAUAAAUAUUCACAGGAAUUGAUCGAUGAACCGCUGCCUCCAGCGACUUCACUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BX833498.1
ncRNA:20   AGCGACCUCCGUCGCCAAGU   1
  ||||||||||||||||||||
targets:206   UCGCUGGAGGCAGCGGUUCA   225

0.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL59ZE08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget