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BaseInfo

ncRNA ID	osa-miRf12058-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - ACCCGGGCCCACAUGUCAGCCUCAC - NA
Stem-loop(if miRNA)	C                   C    ---UC   UCAAACAAAA CAAAUGCCAC CGGGCCCACAUGUCAGCCU ACUC     CAU          G |||||||||| ||||||||||||||||||| ||||     ||| GUUUAUGGUG GCCCGGGUGUACAGUCGGA UGAG     GCC          U           A                   A    UAAUA   CAGGGCGUAG
Stem-loop sequence	CAAAUGCCACCCGGGCCCACAUGUCAGCCUCACUCUCCAUUCAAACAAAAGUGAUGCGGGACCCGAUAAUGAGUAAGGCUGACAUGUGGGCCCGAGUGGUAUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015768737.1	ncRNA:25   CACUCCGACUGUACACCCGGGCCCA   1   |||=|*|||=|||||||||||*||| targets:1214   GUGGGACUGGCAUGUGGGCCCAGGU   1238 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group expansin-B16 (LOC9267660), mRNA	expansin-B16(LOC9267660)	coding protein	psRNATarget
AK240809.1	ncRNA:25   CACUCCGACUGUACACCCGGGCCCA   1   |||=|*|||=|||||||||||*||| targets:950   GUGGGACUGGCAUGUGGGCCCAGGU   974 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065006K12, full insert sequence	NA	coding protein	psRNATarget
CT837848.1	ncRNA:25   CACUCCGACUGUACACCCGGGCCCA   1   |||=|*|||=|||||||||||*||| targets:1063   GUGGGACUGGCAUGUGGGCCCAGGU   1087 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA012I05, full insert sequence	NA	coding protein	psRNATarget
XM_015760575.1	ncRNA:25   CACUC--CGACUGUACACCCGGGCCCA   1   **|||--|||||||*|||||||||||| targets:3   CGGAGACGCUGACACGUGGGCCCGGGU   29 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group SNF1-related protein kinase regulatory subunit gamma-1 (LOC4327751), mRNA	SNF1-related protein kinase regulatory subunit gamma-1(LOC4327751)	coding protein	psRNATarget
AK067939.1	ncRNA:25   CACUCCGACUGUACACCCGGGCCCA   1   *||**||||*||||||||||||||* targets:2360   CUGUUGCUGUCAUGUGGGCCCGGGA   2384 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013124I05, full insert sequence	NA	coding protein	psRNATarget
XM_015757349.1	ncRNA:25   CA-CUCCGACUGUACACCCGGGCCCA   1   ||-|||-|||*||*|||||||||||| targets:512   GUCGAG-CUGUCAGGUGGGCCCGGGU   536 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group peroxidase A2 (LOC4347962), transcript variant X1, mRNA	peroxidase A2(LOC4347962)	coding protein	psRNATarget
XM_015757350.1	ncRNA:25   CA-CUCCGACUGUACACCCGGGCCCA   1   ||-|||-|||*||*|||||||||||| targets:512   GUCGAG-CUGUCAGGUGGGCCCGGGU   536 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group peroxidase A2 (LOC4347962), transcript variant X2, mRNA	peroxidase A2(LOC4347962)	coding protein	psRNATarget
AK104730.1	ncRNA:25   CA-CUCCGACUGUACACCCGGGCCCA   1   ||-|||-|||*||*|||||||||||| targets:477   GUCGAG-CUGUCAGGUGGGCCCGGGU   501 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-038-C06, full insert sequence	NA	coding protein	psRNATarget
AK061462.1	ncRNA:25   CA-CUCCGACUGUACACCCGGGCCCA   1   ||-|||-|||*||*|||||||||||| targets:477   GUCGAG-CUGUCAGGUGGGCCCGGGU   501 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-308-B11, full insert sequence	NA	coding protein	psRNATarget
AK104633.1	ncRNA:25   CA-CUCCGACUGUACACCCGGGCCCA   1   ||-|||-|||*||*|||||||||||| targets:412   GUCGAG-CUGUCAGGUGGGCCCGGGU   436 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-310-C08, full insert sequence	NA	coding protein	psRNATarget