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BaseInfo

ncRNA ID	osa-miRf12053-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - CAUGCCAAAUUUUGGUAAGGCC - NA
Stem-loop(if miRNA)	C    ACUU GUUGGCCUUACCAAAAUUUGGCAUG CAAA    G ||||||||||||||||||||||||| ||||    C CAACCGGAAUGGUUUUAAACCGUAC GUUU    C                          A    AAAA
Stem-loop sequence	GUUGGCCUUACCAAAAUUUGGCAUGCCAAAACUUGCCAAAAUUUGACAUGCCAAAUUUUGGUAAGGCCAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK071719.1	ncRNA:22   CCGGAAUGGUUUUA-AACCGUAC   1   *|||||||||||||-|||||||| targets:1010   UGCCUUACCAAAAUAUUGGCAUG   1032 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023108H11, full insert sequence	NA	coding protein	psRNATarget
XM_015792577.1	ncRNA:22   CCGGAAUGGUUUUA-AACCGUAC   1   *|||||||||||||-|||||||| targets:1086   UGCCUUACCAAAAUAUUGGCAUG   1108 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group calcineurin subunit B (LOC4345696), transcript variant X1, mRNA	calcineurin subunit B(LOC4345696)	coding protein	psRNATarget
AK070212.1	ncRNA:22   CCGGAAUGGUUUUAAACCGUAC   1   **||||=||||||||||||||* targets:1378   UACCUUGCCAAAAUUUGGCAUU   1399 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023044F01, full insert sequence	NA	coding protein	psRNATarget
XM_015786535.1	ncRNA:22   CCGGAAUGGUUUUAAACCGUAC   1   ***||||||||||||||||||* targets:1293   AAACUUACCAAAAUUUGGCAUU   1314 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable WRKY transcription factor 72 (LOC107278717), mRNA	probable WRKY transcription factor 72(LOC107278717)	coding protein	psRNATarget
AK070873.1	ncRNA:22   CC-GGAAUGGUUUUAAACCGUAC   1   ||-||||*||||||||||||||* targets:1698   GGACCUUUCCAAAAUUUGGCAUU   1720 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023071K13, full insert sequence	NA	coding protein	psRNATarget
XM_015789763.1	ncRNA:22   CCGGAAUGGUUUUAAACCGUAC   1   **||||||||||*||||||||* targets:2208   AACCUUACCAAAUUUUGGCAUU   2229 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group nuclear poly(A) polymerase 3 (LOC4344356), mRNA	nuclear poly(A) polymerase 3(LOC4344356)	coding protein	psRNATarget
AK069585.1	ncRNA:22   CCGGAAUGGUUUUAAACCGUAC   1   **||||||||||*||||||||* targets:2801   AACCUUACCAAAUUUUGGCAUU   2822 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023022M24, full insert sequence	NA	coding protein	psRNATarget
XM_015764425.1	ncRNA:22   CCGGAAUGGUUUUAAACCGUAC   1   **|||*|||||||||*|||||| targets:714   UACCUCACCAAAAUUAGGCAUG   735 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system (LOC4351341), transcript variant X2, mRNA	dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system(LOC4351341)	coding protein	psRNATarget
XM_015764426.1	ncRNA:22   CCGGAAUGGUUUUAAACCGUAC   1   **|||*|||||||||*|||||| targets:709   UACCUCACCAAAAUUAGGCAUG   730 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system (LOC4351341), transcript variant X3, mRNA	dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system(LOC4351341)	coding protein	psRNATarget