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BaseInfo

ncRNA ID	osa-miRf12029-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - AUGUUGGCCGCCGCCGCUGCCAU - NA
Stem-loop(if miRNA)	G   U      CC     UG    G AAG   UG  G   UA C AUG UGGCCG  GCCGC  CCAU G   CGC  CC GCG  G | ||| ||||||  |||||  |||| |   |||  || ||| G UAC GCCGGU  CGGUG  GGUA C   GCG  GG CGU  U  G   U      AC     GU    G --A   GU  A   CG
Stem-loop sequence	CGAUGUUGGCCGCCGCCGCUGCCAUGGAAGCGCUGCCGGCGUAGUGCUGCAGGUGGCGACGAUGGUGGUGGCCAUGGCCGUCAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015764011.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   ||||||||||||||||||||||| targets:911   AUGGCAGCGGCGGCGGCCAACAU   933 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 41-like (LOC107277673), mRNA	NAC domain-containing protein 41-like(LOC107277673)	coding protein	psRNATarget
XM_015771808.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   |||||=|||||||||||*||||| targets:445   AUGGCGGCGGCGGCGGCGAACAU   467 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (LOC4329524), transcript variant X1, mRNA	putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2(LOC4329524)	coding protein	psRNATarget
XM_015771809.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   |||||=|||||||||||*||||| targets:444   AUGGCGGCGGCGGCGGCGAACAU   466 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (LOC4329524), transcript variant X2, mRNA	putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2(LOC4329524)	coding protein	psRNATarget
XM_015771810.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   |||||=|||||||||||*||||| targets:450   AUGGCGGCGGCGGCGGCGAACAU   472 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 (LOC4329524), transcript variant X3, mRNA	putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2(LOC4329524)	coding protein	psRNATarget
AK067085.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   |||||=|||||||||||||*||| targets:1324   AUGGCGGCGGCGGCGGCCACCAU   1346 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013096I15, full insert sequence	NA	coding protein	psRNATarget
XM_015756743.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   |||||=|||||||||||||*||| targets:988   AUGGCGGCGGCGGCGGCCACCAU   1010 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable cinnamyl alcohol dehydrogenase 8C (LOC9269515), mRNA	probable cinnamyl alcohol dehydrogenase 8C(LOC9269515)	coding protein	psRNATarget
XM_015783125.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   =*|||=|||||||||||||=||| targets:1075   GCGGCGGCGGCGGCGGCCAGCAU   1097 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group scarecrow-like protein 3 (LOC107275640), mRNA	scarecrow-like protein 3(LOC107275640)	coding protein	psRNATarget
AK065705.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   =*|||=||||||||||||||||* targets:48   GCGGCGGCGGCGGCGGCCAACAA   70 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013035F20, full insert sequence	NA	coding protein	psRNATarget
AK064149.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   =*|||=||||||||||||||||* targets:87   GCGGCGGCGGCGGCGGCCAACAA   109 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-103-D01, full insert sequence	NA	coding protein	psRNATarget
XM_015785266.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   =*|||=*|||||||||||||||| targets:1556   GAGGCGCCGGCGGCGGCCAACAU   1578 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9267436 (LOC9267436), mRNA	uncharacterized LOC9267436(LOC9267436)	coding protein	psRNATarget
AK072262.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   =*|||=*|||||||||||||||| targets:885   GAGGCGCCGGCGGCGGCCAACAU   907 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023005F03, full insert sequence	NA	coding protein	psRNATarget
AK109853.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   =*|||=*|||||||||||||||| targets:568   GAGGCGCCGGCGGCGGCCAACAU   590 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-148-F11, full insert sequence	NA	coding protein	psRNATarget
XM_015761559.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   ||**|=|||||||||||||||=| targets:362   AUCCCGGCGGCGGCGGCCAACGU   384 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable methyltransferase PMT26 (LOC4349967), transcript variant X1, mRNA	probable methyltransferase PMT26(LOC4349967)	coding protein	psRNATarget
XM_015761560.1	ncRNA:23   UACCGUCGCCGCCGCCGGUUGUA   1   ||**|=|||||||||||||||=| targets:308   AUCCCGGCGGCGGCGGCCAACGU   330 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable methyltransferase PMT26 (LOC4349967), transcript variant X2, mRNA	probable methyltransferase PMT26(LOC4349967)	coding protein	psRNATarget