Search result

BaseInfo

ncRNA ID	osa-miRf12024-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUUCUCUGACGUAAAGUCAGAGG - NA
Stem-loop(if miRNA)	U  UC                      -CCACC   ACGUCAGUGACCUAUGUUCCUAU GAG CU  UCUGACGUAAAGUCAGAGGGAC      CAC                       G ||| ||  ||||||||||||||||||||||      |||                       U UUC GA  AGACUGCAUUUCAGUCUCCCUG      GUG                       U    C  GA                      CACCCA   ACUGCACACCCAGUGUGCAGUCA
Stem-loop sequence	GAGUCUUCUCUGACGUAAAGUCAGAGGGACCCACCCACACGUCAGUGACCUAUGUUCCUAUGUUACUGACGUGUGACCCACACGUCAGUGACCCACGUCCCUCUGACUUUACGUCAGAAGAGCCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015787285.1	ncRNA:23   GGAGACUGAAAUGCAGUCUCUUC   1   ||||||||||||||||||||=|| targets:1054   CCUCUGACUUUACGUCAGAGGAG   1076 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group very-long-chain 3-oxoacyl-CoA reductase 1-like (LOC107276302), mRNA	very-long-chain 3-oxoacyl-CoA reductase 1-like(LOC107276302)	coding protein	psRNATarget
XM_015785140.1	ncRNA:23   GGAGACUGAAAUGCAGUCUCUUC   1   ||||||||||||||||||||||* targets:1950   CCUCUGACUUUACGUCAGAGAAU   1972 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group putative pectinesterase/pectinesterase inhibitor 22 (LOC4327711), mRNA	putative pectinesterase/pectinesterase inhibitor 22(LOC4327711)	coding protein	psRNATarget
XM_015786524.1	ncRNA:23   GGAGACUGAAAUGCAGUCUCUUC   1   |||||*||||||||||||||=|| targets:711   CCUCUAACUUUACGUCAGAGGAG   733 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group VQ motif-containing protein 10 (LOC4341202), mRNA	VQ motif-containing protein 10(LOC4341202)	coding protein	psRNATarget
AK103210.1	ncRNA:23   GGAGACUGAAAUGCAGUCUCUUC   1   |||||*||||||||||||||=|| targets:1295   CCUCUAACUUUACGUCAGAGGAG   1317 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033122L17, full insert sequence	NA	coding protein	psRNATarget