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BaseInfo

ncRNA ID	osa-miRf12012-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UCCUGGUUGGUAACACCAACCGG - NA
Stem-loop(if miRNA)	CUC         U                UAAAU      ----UUAG  GUAUGGCGAUCUUUUUUC AUCUUUA   CCGGUUGGU UUACCAACCGGGACUA     AGAUCU        GC                  C |||||||   ||||||||| ||||||||||||||||     ||||||        ||                  C UAGAAAU   GGCCAACCA AAUGGUUGGUCCUGAU     UCUAGA        AG                  G        CAU         C                ----U      UAAACAUC  GGCCAACUAUUGUAGUUG
Stem-loop sequence	AUCUUUACUCCCGGUUGGUUUUACCAACCGGGACUAUAAAUAGAUCUUUAGGCGUAUGGCGAUCUUUUUUCCCGGUUGAUGUUAUCAACCGGGACUACAAAUAGAUCUUUAGUCCUGGUUGGUAACACCAACCGGUACUAAAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   |||||||||||||||||||=||| targets:158   CCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   |||||||||*|||||||||=||| targets:115   CCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288377.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   |||||||||||||||||||*||| targets:1387   CCGGUUGGUGUUACCAACCUGGA   1409 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   |||||||||||*||||||||||| targets:566   CCGGUUGGUGUCACCAACCAGGA   588 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   ||||||*|||||||||||||||| targets:4964   CCGGUUAGUGUUACCAACCAGGA   4986 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
HI404286.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   ||||||*||||||=||||||||| targets:53   CCGGUUAGUGUUAUCAACCAGGA   75 Target Full Sequence	2.5	Sequence 2411 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236416.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   ||||||*||||||=||||||||| targets:53   CCGGUUAGUGUUAUCAACCAGGA   75 Target Full Sequence	2.5	Sequence 2411 from Patent EP2985353	NA	coding protein	psRNATarget
JB164747.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   ||||||*||||||=||||||||| targets:53   CCGGUUAGUGUUAUCAACCAGGA   75 Target Full Sequence	2.5	Sequence 2411 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   ||||||*||||||||||||=||| targets:917   CCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288424.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   ||||||*||||||||||||=||| targets:2392   CCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   ||*||||||||||||||||=||| targets:2399   CCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   |||||||||*||||||||||*|| targets:1919   CCGGUUGGUAUUACCAACCAUGA   1941 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   =||||||||*|||||||||||*| targets:406   UCGGUUGGUAUUACCAACCAGAA   428 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK065349.1	ncRNA:23   GGCCAACCACAAUGGUUGGUCCU   1   *****||*|*||||||||||||| targets:2313   AAAAAUGAUCUUACCAACCAGGA   2335 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013022H13, full insert sequence	NA	coding protein	psRNATarget