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BaseInfo

ncRNA ID	osa-miRf12003-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UGGGACCUAUGUGGACCCCACAUGU - NA
Stem-loop(if miRNA)	U        A              A             U        -  ------------------------GG   G AAGAGAAGAG G  GAGUUAGC UGGGACCUAUGUGG CCCCACAUGUUAG AUGCCACG CA                          CCU C          U A  |||||||| |||||||||||||| ||||||||||||| |||||||| ||                          ||| |          |  CUCAAUCG ACCCUGGGUGCACC GGGGUGUACAGUC UACGGUGC GU                          GGA G          G G A        C              C             C        A  AGAGAGAAAGGGGAGAAGAGAGGGAA   G -AGGAGGAGA A
Stem-loop sequence	UGAGUUAGCAUGGGACCUAUGUGGACCCCACAUGUUAGUAUGCCACGCAGGCCUGCAAGAGAAGAGUGAGAGAGAGGAGGAGGAGGAAGGGAGAGAAGAGGGGAAAGAGAGAUGACGUGGCAUCCUGACAUGUGGGGCCCACGUGGGUCCCACGCUAACUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761178.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   |||||||||||||||||=||||||| targets:1297   ACAUGUGGGGUCCACAUGGGUCCCA   1321 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276677 (LOC107276677), transcript variant X1, mRNA	uncharacterized LOC107276677(LOC107276677)	coding protein	psRNATarget
XM_015791275.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   |||||||||||=|||||=||||||| targets:1229   ACAUGUGGGGUUCACAUGGGUCCCA   1253 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271800 (LOC9271800), mRNA	uncharacterized LOC9271800(LOC9271800)	coding protein	psRNATarget
AK242375.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   |=|||||||||||||=||||||||| targets:1226   AUAUGUGGGGUCCACGUAGGUCCCA   1250 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J080039F09, full insert sequence	NA	coding protein	psRNATarget
XM_015787239.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   ||||||||||*||||||=||||||| targets:1348   ACAUGUGGGGCCCACAUGGGUCCCA   1372 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277241 (LOC107277241), mRNA	uncharacterized LOC107277241(LOC107277241)	coding protein	psRNATarget
XM_015789181.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   ||||||*||||||||||=||||||| targets:1191   ACAUGUCGGGUCCACAUGGGUCCCA   1215 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278291 (LOC107278291), transcript variant X2, mRNA	uncharacterized LOC107278291(LOC107278291)	coding protein	psRNATarget
XM_015789172.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   ||||||*||||||||||=||||||| targets:1287   ACAUGUCGGGUCCACAUGGGUCCCA   1311 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278291 (LOC107278291), transcript variant X1, mRNA	uncharacterized LOC107278291(LOC107278291)	coding protein	psRNATarget
XM_015788354.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   =|||||||||*||||||=||||||| targets:1013   GCAUGUGGGGCCCACAUGGGUCCCA   1037 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group S-adenosylmethionine synthase 2-like (LOC4327097), mRNA	S-adenosylmethionine synthase 2-like(LOC4327097)	coding protein	psRNATarget
XM_015788954.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   |=||||||||*||||=||||||||| targets:1346   AUAUGUGGGGCCCACGUAGGUCCCA   1370 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278514 (LOC107278514), transcript variant X1, mRNA	uncharacterized LOC107278514(LOC107278514)	coding protein	psRNATarget
AK069527.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   ||||*|||||*||||||=||||||| targets:1199   ACAUAUGGGGCCCACAUGGGUCCCA   1223 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023021N13, full insert sequence	NA	coding protein	psRNATarget
XM_015778861.1	ncRNA:25   UGUACACCCCAGGUGUAUCCAGGGU   1   ||**||||||*||||=||||||||| targets:1419   ACUCGUGGGGCCCACGUAGGUCCCA   1443 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL45-like (LOC107278612), mRNA	RING-H2 finger protein ATL45-like(LOC107278612)	coding protein	psRNATarget