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BaseInfo

ncRNA ID ath-miRf10248-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUUGGAUUUGGUCUGAUUAC - NA
Stem-loop(if miRNA)                                       -ACA  G
CAAUACAUUCGUAAUCAGACCAAAUCCAAGAGCUAUAC    UG C
||||||||||||||||||||||||||||||||||||||    ||
GUUAUGUAAGCAUUAGUCUGGUUUAGGUUCUCGAUAUG    AC A
                                      CCUA  A
Stem-loop sequence CAAUACAUUCGUAAUCAGACCAAAUCCAAGAGCUAUACACAUGGCAACAAUCCGUAUAGCUCUUGGAUUUGGUCUGAUUACGAAUGUAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT010380.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:56   GCAGUCAGACCAAAUCCAAG   75

2.0 Arabidopsis thaliana At5g66210 mRNA, complete cds NA coding protein psRNATarget
BX829532.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:24   GCAGUCAGACCAAAUCCAAG   43

2.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
AK317109.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:65   GCAGUCAGACCAAAUCCAAG   84

2.0 Arabidopsis thaliana AT5G66210 mRNA, complete cds, clone: RAFL21-47-B11 NA coding protein psRNATarget
AK227052.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:71   GCAGUCAGACCAAAUCCAAG   90

2.0 Arabidopsis thaliana mRNA for calcium-dependent protein kinase, complete cds, clone: RAFL09-60-H08 NA coding protein psRNATarget
AY085837.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:120   GCAGUCAGACCAAAUCCAAG   139

2.0 Arabidopsis thaliana clone 18901 mRNA, complete sequence NA coding protein psRNATarget
NM_001085337.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:246   GCAGUCAGACCAAAUCCAAG   265

2.0 Arabidopsis thaliana calcium-dependent protein kinase 28 (CPK28), mRNA calcium-dependent protein kinase 28(CPK28) coding protein psRNATarget
AY139991.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:70   GCAGUCAGACCAAAUCCAAG   89

2.0 Arabidopsis thaliana calcium-dependent protein kinase (At5g66210) mRNA, complete cds NA coding protein psRNATarget
NM_126019.4
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:138   GCAGUCAGACCAAAUCCAAG   157

2.0 Arabidopsis thaliana calcium-dependent protein kinase 28 (CPK28), mRNA calcium-dependent protein kinase 28(CPK28) coding protein psRNATarget
AK229317.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:65   GCAGUCAGACCAAAUCCAAG   84

2.0 Arabidopsis thaliana mRNA for calcium-dependent protein kinase, complete cds, clone: RAFL16-57-N22 NA coding protein psRNATarget
NM_180949.3
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:246   GCAGUCAGACCAAAUCCAAG   265

2.0 Arabidopsis thaliana calcium-dependent protein kinase 28 (CPK28), mRNA calcium-dependent protein kinase 28(CPK28) coding protein psRNATarget
NM_001345751.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:246   GCAGUCAGACCAAAUCCAAG   265

2.0 Arabidopsis thaliana calcium-dependent protein kinase 28 (CPK28), mRNA calcium-dependent protein kinase 28(CPK28) coding protein psRNATarget
NM_001126036.2
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:246   GCAGUCAGACCAAAUCCAAG   265

2.0 Arabidopsis thaliana calcium-dependent protein kinase 28 (CPK28), mRNA calcium-dependent protein kinase 28(CPK28) coding protein psRNATarget
NM_001345752.1
ncRNA:20   CAUUAGUCUGGUUUAGGUUC   1
  |*|=||||||||||||||||
targets:276   GCAGUCAGACCAAAUCCAAG   295

2.0 Arabidopsis thaliana calcium-dependent protein kinase 28 (CPK28), mRNA calcium-dependent protein kinase 28(CPK28) coding protein psRNATarget
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