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BaseInfo

ncRNA ID	ath-miRf10246-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - ACUGAUACGGCCCAUUAAGA - NA
Stem-loop(if miRNA)	U                    A UU   AUUUA GCCCAAUU UUCUUAAUGGGUCGUAUCAG C  UAU     U |||||||| |||||||||||||||||||| |  ||| CGGGUUAA AAGAAUUACCCGGCAUAGUC G  AUA     U         C                    A UC   CUACC
Stem-loop sequence	GCCCAAUUUUUCUUAAUGGGUCGUAUCAGACUUUAUAUUUAUUCCAUCAUACUGACUGAUACGGCCCAUUAAGAACAAUUGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK175442.1	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   |*|||||||||||||||||| targets:566   UGUUAAUGGGCCGUAUCAGU   585 Target Full Sequence	1.0	Arabidopsis thaliana mRNA for putative cytochrome b5, partial cds, clone: RAFL21-87-D14	NA	coding protein	psRNATarget
BX821751.1	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   |*|||||||||||||||||| targets:672   UGUUAAUGGGCCGUAUCAGU   691 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY087658.1	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   |*|||||||||||||||||| targets:695   UGUUAAUGGGCCGUAUCAGU   714 Target Full Sequence	1.0	Arabidopsis thaliana clone 3743 mRNA, complete sequence	NA	coding protein	psRNATarget
AK175189.1	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   |*|||||||||||||||||| targets:695   UGUUAAUGGGCCGUAUCAGU   714 Target Full Sequence	1.0	Arabidopsis thaliana mRNA for putative cytochrome b5, complete cds, clone: RAFL21-60-O15	NA	coding protein	psRNATarget
NM_130230.3	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   |*|||||||||||||||||| targets:867   UGUUAAUGGGCCGUAUCAGU   886 Target Full Sequence	1.0	Arabidopsis thaliana cytochrome B5 isoform C (CB5-C), mRNA	cytochrome B5 isoform C(CB5-C)	coding protein	psRNATarget
NM_001333725.1	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   ||*||||||||||||*|||| targets:333   UCAUAAUGGGCCGUAGCAGU   352 Target Full Sequence	2.5	Arabidopsis thaliana BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) mRNA	BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)(AT1G55750)	coding protein	psRNATarget
NM_001333727.1	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   ||*||||||||||||*|||| targets:333   UCAUAAUGGGCCGUAGCAGU   352 Target Full Sequence	2.5	Arabidopsis thaliana BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) mRNA	BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)(AT1G55750)	coding protein	psRNATarget
NM_001333726.1	ncRNA:20   AGAAUUACCCGGCAUAGUCA   1   ||*||||||||||||*|||| targets:333   UCAUAAUGGGCCGUAGCAGU   352 Target Full Sequence	2.5	Arabidopsis thaliana BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) mRNA	BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)(AT1G55750)	coding protein	psRNATarget